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2026
  • 3' BRB-seq, BRB-seq

Cell-cycle inhibition preserves robust development but rebalances lineages in mouse gastruloids.

Maxine Leonardi, Yves Paychère, Felix Naef.
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2026
  • 3' BRB-seq, BRB-seq

Computational Multiplexed Transcriptomic Analysis: Modes Of Action In The Fungal Plant Pathogen Botrytis Cinerea

Yunhee Jeong, Benjamin Buer, Nicolas Arning, Tabea Schlemeyerb, Luigi Di Vierto, Alix Buu Hoang, Sven Geibel
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2026

Linking high-throughput transcriptomics and imaging for functional drug response profiling

Alexandre Coudray, Silja Placzek, Marine Vallez, Alix Buu Hoang, Vincent Hahaut and Daniel Alpern
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2026

1536-DRUG-seq: Transcriptomics Platform for Ultra-Scalable Phenotypic Screening

Elodie Koenig, Mark Ofield, Adam Peall, Elizabeth Bourne, Humberto Ferreira, Ji Hoon Han, Silja Placzek, Marine Vallez, Vincent Hahaut, Riccardo Dainese, Daniel Alpern
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2020
  • 3' BRB-seq, BRB-seq

Inter-embryo gene expression variability recapitulates the hourglass pattern of evo-devo.

Liu, J., Frochaux, M., Gardeux, V., Deplancke, B., & Robinson-Rechavi, M.
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2020
  • 3' BRB-seq, BRB-seq

Mitochondrial gene signature in the prefrontal cortex for differential susceptibility to chronic stress.

Weger, M., Alpern, D., Cherix, A., Ghosal, S., Grosse, J., Russeil, J., Gruetter, R., de Kloet, E. R., Deplancke, B., & Sandi, C.
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2020
  • 3' BRB-seq, BRB-seq

Classification of four distinct osteoarthritis subtypes with a knee joint tissue transcriptome atlas.

Yuan, C., Pan, Z., Zhao, K., Li, J., Sheng, Z., Yao, X., Liu, H., Zhang, X., Yang, Y., Yu, D., Zhang, Y., Xu, Y., Zhang, Z.-Y., Huang, T., Liu, W., & Ouyang, H.
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2020
  • 3' BRB-seq, BRB-seq

Cis-regulatory variation modulates susceptibility to enteric infection in the Drosophila genetic reference panel.

Frochaux, M. V., Bou Sleiman, M., Gardeux, V., Dainese, R., Hollis, B., Litovchenko, M., Braman, V. S., Andreani, T., Osman, D., & Deplancke, B.
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2019
  • 3' BRB-seq, BRB-seq

Commensal Gut Bacteria Buffer the Impact of Host Genetic Variants on Drosophila Developmental Traits under Nutritional Stress.

Ma, D., Bou-Sleiman, M., Joncour, P., Indelicato, C.-E., Frochaux, M., Braman, V., Litovchenko, M., Storelli, G., Deplancke, B., & Leulier, F.
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2019

Systems-Genetics-Based Inference of a Core Regulatory Network Underlying White Fat Browning.

Li, Y., Schwalie, P. C., Bast-Habersbrunner, A., Mocek, S., Russeil, J., Fromme, T., Deplancke, B., & Klingenspor, M.
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2019
  • 3' BRB-seq, BRB-seq

Mitochondrial haplotypes affect metabolic phenotypes in the Drosophila Genetic Reference Panel.

Bevers, R. P. J., Litovchenko, M., Kapopoulou, A., Braman, V. S., Robinson, M. R., Auwerx, J., Hollis, B., & Deplancke, B.
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2019
  • 3' BRB-seq, BRB-seq

Sex-dependent and sex-independent regulatory systems of size variation in natural populations.

Okada, H., Yagi, R., Gardeux, V., Deplancke, B., & Hafen, E.
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